Cupples, Alison M.: search on Z-Library

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1

Principles and Applications of Soil Microbiology, Second Edition

Cupples, Alison M.

Journal:

Journal of Environmental Quality

Year:

2005

File:

PDF, 63 KB

2005

2

Novel aerobic benzene degrading microorganisms identified in three soils by stable isotope probing

Shuguang Xie, Weimin Sun, Chunling Luo, Alison M. Cupples

Journal:

Year:

2011

Language:

english

File:

PDF, 288 KB

english, 2011

3

Identification of in situ 2,4-dichlorophenoxyacetic acid-degrading soil microorganisms using DNA-stable isotope probing

Alison M. Cupples, Gerald K. Sims

Journal:

Soil Biology and Biochemistry

Year:

2007

Language:

english

File:

PDF, 248 KB

english, 2007

4

The effect of the potential fuel additive isobutanol on benzene, toluene, ethylbenzene, and p -xylene degradation in aerobic soil microcosms

Ding, Liang, Cupples, Alison M.

Journal:

Environmental Technology

Year:

2015

Language:

english

File:

PDF, 293 KB

english, 2015

5

Real-time PCR quantification of Dehalococcoides populations: Methods and applications

Alison M. Cupples

Journal:

Journal of Microbiological Methods

Year:

2008

Language:

english

File:

PDF, 257 KB

english, 2008

6

Vinyl Chloride and cis -Dichloroethene Dechlorination Kinetics and Microorganism Growth under Substrate Limiting Conditions

Cupples, Alison M., Spormann, Alfred M., McCarty, Perry L.

Journal:

Environmental Science & Technology

Year:

2004

Language:

english

File:

PDF, 129 KB

english, 2004

7

Most probable number with visual based LAMP for the quantification of reductive dehalogenase genes in groundwater samples

Kanitkar, Yogendra H., Stedtfeld, Robert D., Hatzinger, Paul B., Hashsham, Syed A., Cupples, Alison M.

Journal:

Journal of Microbiological Methods

Year:

2017

Language:

english

File:

PDF, 1.07 MB

english, 2017

8

Stable Isotope Probing Identifies Novelm-Xylene Degraders in Soil Microcosms from Contaminated and Uncontaminated Sites

Shuguang Xie, Weimin Sun, Chunling Luo, Alison M. Cupples

Journal:

Water, Air & Soil Pollution

Year:

2010

Language:

english

File:

PDF, 198 KB

english, 2010

9

Detection of the antimicrobials triclocarban and triclosan in agricultural soils following land application of municipal biosolids

Jongmun Cha, Alison M. Cupples

Journal:

Year:

2009

Language:

english

File:

PDF, 284 KB

english, 2009

10

High throughput quantification of the functional genes associated with RDX biodegradation using the SmartChip real-time PCR system

Collier, J. M., Chai, B., Cole, J. R., Michalsen, M. M., Cupples, Alison M.

Journal:

Applied Microbiology and Biotechnology

Year:

2019

Language:

english

File:

PDF, 1.70 MB

english, 2019

11

RDX Degradation Potential in Soils Previously Unexposed to RDX and the Identification of RDX-Degrading Species in One Agricultural Soil Using Stable Isotope Probing

Jayamani, Indumathy, Manzella, Michael P., Cupples, Alison M.

Journal:

Water, Air & Soil Pollution

Year:

2013

Language:

english

File:

PDF, 492 KB

english, 2013

12

A novel method to characterize bacterial communities affected by carbon source and electricity generation in microbial fuel cells using stable isotope probing and Illumina sequencing

Song, Yang, Xiao, Li, Jayamani, Indumathy, He, Zhen, Cupples, Alison M.

Journal:

Journal of Microbiological Methods

Year:

2015

Language:

english

File:

PDF, 798 KB

english, 2015

13

Microbial community characterization and functional gene quantification in RDX-degrading microcosms derived from sediment and groundwater at two naval sites

Wilson, Fernanda Paes, Cupples, Alison M.

Journal:

Applied Microbiology and Biotechnology

Year:

2016

Language:

english

File:

PDF, 937 KB

english, 2016

14

Development and application of a rapid, user-friendly, and inexpensive method to detectDehalococcoidessp. reductive dehalogenase genes from groundwater

Kanitkar, Yogendra H., Stedtfeld, Robert D., Hatzinger, Paul B., Hashsham, Syed A., Cupples, Alison M.

Journal:

Applied Microbiology and Biotechnology

Year:

2017

Language:

english

File:

PDF, 813 KB

english, 2017

15

Integrated methodological approach reveals microbial diversity and functions in aerobic groundwater microcosms adapted to vinyl chloride

Liu, Xikun, Wu, Yang, Wilson, Fernanda P, Yu, Ke, Lintner, Carly, Cupples, Alison M, Mattes, Timothy E

Journal:

FEMS Microbiology Ecology

Year:

2018

Language:

english

File:

PDF, 1.30 MB

english, 2018

16

Abundance of Chlorinated Solvent and 1,4-Dioxane Degrading Microorganisms at Five Chlorinated Solvent Contaminated Sites Determined via Shotgun Sequencing

Dang, Hongyu, Kanitkar, Yogendra H., Stedtfeld, Robert D., Hatzinger, Paul B., Hashsham, Syed A., Cupples, Alison M.

Journal:

Environmental Science & Technology

Year:

2018

Language:

english

File:

PDF, 317 KB

english, 2018

17

Influence of terminal electron-accepting conditions on the soil microbial community and degradation of organic contaminants of emerging concern

Fang, Yida, Vanzin, Gary, Cupples, Alison M., Strathmann, Timothy J.

Journal:

Science of The Total Environment

Year:

2020

File:

PDF, 2.73 MB

2020

18

Determination of triclocarban and triclosan in biosolid and soil samples by application of pressurized liquid extraction and liquid chromatography with tandem mass spectrometry

Cha, Jongmun, Cupples, Alison M

Journal:

Geosystem Engineering

Year:

2012

Language:

english

File:

PDF, 292 KB

english, 2012

19

Factors controlling degradation of pesticides in soil

Sims, Gerald K, Cupples, Alison M

Journal:

Pesticide Science

Year:

1999

Language:

english

File:

PDF, 189 KB

english, 1999

20

DNA Extraction-Free Quantification of Dehalococcoides spp. in Groundwater Using a Hand-Held Device

Stedtfeld, Robert D., Stedtfeld, Tiffany M., Kronlein, Maggie, Seyrig, Gregoire, Steffan, Robert J., Cupples, Alison M., Hashsham, Syed A.

Journal:

Environmental Science & Technology

Year:

2014

Language:

english

File:

PDF, 1.87 MB

english, 2014

21

The use of nucleic acid based stable isotope probing to identify the microorganisms responsible for anaerobic benzene and toluene biodegradation

Alison M. Cupples

Journal:

Journal of Microbiological Methods

Year:

2011

Language:

english

File:

PDF, 294 KB

english, 2011

22

Comparative Evaluation of Chloroethene Dechlorination to Ethene by Dehalococcoides -like Microorganisms

Cupples, Alison M., Spormann, Alfred M., McCarty, Perry L.

Journal:

Environmental Science & Technology

Year:

2004

Language:

english

File:

PDF, 116 KB

english, 2004

23

Polyunsaturated fatty acids modulate the effects of the APOA1 G-A polymorphism on HDL-cholesterol concentrations in a sex-specific manner: the Framingham Study

Ordovas, Jose M, Corella, Dolores, Cupples, L Adrienne, Demissie, Serkalem, Kelleher, Alison, Coltell, Oscar, Wilson, Peter WF, Schaefer, Ernst J, Tucker, Katherine

Journal:

American Journal of Clinical Nutrition

Year:

2002

Language:

english

File:

PDF, 134 KB

english, 2002

24

Effect of Soil Conditions on the Degradation of Cloransulam-Methyl

Cupples, Alison M., Sims, Gerald K., Hultgren, Ryan P., Hart, Steven E.

Journal:

Journal of Environmental Quality

Year:

2000

File:

PDF, 255 KB

2000

25

Stable isotope probing reveals the importance of Comamonas and Pseudomonadaceae in RDX degradation in samples from a Navy detonation site

Jayamani, Indumathy, Cupples, Alison M.

Journal:

Environmental Science and Pollution Research

Year:

2015

Language:

english

File:

PDF, 742 KB

english, 2015

26

Most probable number - loop mediated isothermal amplification (MPN-LAMP) for quantifying waterborne pathogens in

Ahmad, Farhan, Stedtfeld, Robert D., Waseem, Hassan, Williams, Maggie R., Cupples, Alison M., Tiedje, James M., Hashsham, Syed A.

Journal:

Journal of Microbiological Methods

Year:

2017

Language:

english

File:

PDF, 906 KB

english, 2017

27

Stable Isotope Probing and High-Throughput Sequencing Implicate Xanthomonadaceae and Rhodocyclaceae in Ethylbenzene Degradation

Jayamani, Indumathy, Cupples, Alison M.

Journal:

Environmental Engineering Science

Year:

2015

Language:

english

File:

PDF, 462 KB

english, 2015

28

Elucidating carbon uptake from vinyl chloride using stable isotope probing and Illumina sequencing

Paes, Fernanda, Liu, Xikun, Mattes, Timothy E., Cupples, Alison M.

Journal:

Applied Microbiology and Biotechnology

Year:

2015

Language:

english

File:

PDF, 462 KB

english, 2015

29

Anaerobic 1,4-dioxane biodegradation and microbial community analysis in microcosms inoculated with soils or sediments and different electron acceptors

Ramalingam, Vidhya, Cupples, Alison M.

Journal:

Applied Microbiology and Biotechnology

Year:

2020

Language:

english

File:

PDF, 2.07 MB

english, 2020

30

Effect of isobutanol on toluene biodegradation in nitrate amended, sulfate amended and methanogenic enrichment microcosms

Indumathy Jayamani, Alison M. Cupples

Journal:

Year:

2013

Language:

english

File:

PDF, 377 KB

english, 2013

31

Presence, diversity and enumeration of functional genes (bssAandbamA) relating to toluene degradation across a range of redox conditions and inoculum sources

Sun, Weimin, Sun, Xiaxuo, Cupples, Alison M.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.04 MB

english, 2014

32

Identification of Desulfosporosinus as toluene-assimilating microorganisms from a methanogenic consortium

Sun, Weimin, Sun, Xiaoxu, Cupples, Alison M.

Journal:

International Biodeterioration & Biodegradation

Year:

2014

Language:

english

File:

PDF, 797 KB

english, 2014

33

Contaminant-Degrading Microorganisms Identified Using Stable Isotope Probing

Cupples, Alison M.

Journal:

Chemical Engineering & Technology

Year:

2016

Language:

english

File:

PDF, 212 KB

english, 2016

34

Carbamazepine, triclocarban and triclosan biodegradation and the phylotypes and functional genes associated with xenobiotic degradation in four agricultural soils

Thelusmond, Jean-Rene, Strathmann, Timothy J., Cupples, Alison M.

Journal:

Science of The Total Environment

Year:

2019

Language:

english

File:

PDF, 3.60 MB

english, 2019

35

RDX degrading microbial communities and the prediction of microorganisms responsible for RDX bioremediation

Cupples, Alison M.

Journal:

International Biodeterioration & Biodegradation

Year:

2013

Language:

english

File:

PDF, 395 KB

english, 2013

36

Direct loop mediated isothermal amplification on filters for quantification of Dehalobacter in groundwater

Stedtfeld, Robert D, Stedtfeld, Tiffany M, Samhan, Farag, Kanitkar, Yogendra H, Hatzinger, Paul B., Cupples, Alison M, Hashsham, Syed A

Journal:

Journal of Microbiological Methods

Year:

2016

Language:

english

File:

PDF, 737 KB

english, 2016

37

DNA buoyant density shifts during 15N-DNA stable isotope probing

Alison M. Cupples, Elizabeth A. Shaffer, Joanne C. Chee-Sanford, Gerald K. Sims

Journal:

Microbiological Research

Year:

2007

Language:

english

File:

PDF, 293 KB

english, 2007

38

Nocardioides,Sediminibacterium,Aquabacterium,Variovorax, andPseudomonaslinked to carbon uptake during aerobic vinyl chloride biodegradation

Wilson, Fernanda Paes, Liu, Xikun, Mattes, Timothy E., Cupples, Alison M.

Journal:

Environmental Science and Pollution Research

Year:

2016

Language:

english

File:

PDF, 856 KB

english, 2016

39

Enrichment of novel Actinomycetales and the detection of monooxygenases during aerobic 1,4-dioxane biodegradation with uncontaminated and contaminated inocula

Ramalingam, Vidhya, Cupples, Alison M.

Journal:

Applied Microbiology and Biotechnology

Year:

2020

Language:

english

File:

PDF, 1.70 MB

english, 2020

40

Triclocarban and triclosan biodegradation at field concentrations and the resulting leaching potentials in three agricultural soils

Jongmun Cha, Alison M. Cupples

Journal:

Year:

2010

Language:

english

File:

PDF, 331 KB

english, 2010

41

Selection of fluorescent DNA dyes for real-time LAMP with portable and simple optics

Seyrig, Gregoire, Stedtfeld, Robert D., Tourlousse, Dieter M., Ahmad, Farhan, Towery, Keara, Cupples, Alison M., Tiedje, James M., Hashsham, Syed A.

Journal:

Journal of Microbiological Methods

Year:

2015

Language:

english

File:

PDF, 700 KB

english, 2015

42

Diclofenac, carbamazepine and triclocarban biodegradation in agricultural soils and the microorganisms and metabolic pathways affected

Thelusmond, Jean-Rene, Kawka, Emily, Strathmann, Timothy J., Cupples, Alison M.

Journal:

Science of The Total Environment

Year:

2018

Language:

english

File:

PDF, 3.37 MB

english, 2018

43

A comparative study of microbial communities in four soil slurries capable of RDX degradation using illumina sequencing

Jayamani, Indumathy, Cupples, Alison M.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.22 MB

english, 2015

44

The identification of carbamazepine biodegrading phylotypes and phylotypes sensitive to carbamazepine exposure in two soil microbial communities

Thelusmond, Jean-Rene, Strathmann, Timothy J., Cupples, Alison M.

Journal:

Science of The Total Environment

Year:

2016

Language:

english

File:

PDF, 1.70 MB

english, 2016

45

Development of Loop Mediated Isothermal Amplification (LAMP) for Rapid Detection and Quantification of Dehalococcoides spp. Biomarker Genes in Commercial Reductive Dechlorinating Cultures KB-1 and SDC-9

Kanitkar, Yogendra H., Stedtfeld, Robert D., Steffan, Robert J., Hashsham, Syed A., Cupples, Alison M.

Journal:

Applied and Environmental Microbiology

Year:

2016

Language:

english

File:

PDF, 492 KB

english, 2016

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